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10 Best Shopify Payment Apps – 2025
Last modified: January 6, 2025
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Bold Subscriptions
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Front Systems
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Split ‑ Partial Payments
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Recurring Payments & Orders
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Advanced PreOrder(Partial Pay)
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Membership Subscription Order
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Affirm pay‑over‑time messaging
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Point of Sale
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| 9 |
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Simplio: Simple Invoice
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| 10 |
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Conekta Offline Payments
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When it comes to business, there are two things that you need to do. The first is to have a product/service to sell. The second is to have a way to collect payments from your customers. Taking payments on Shopify is easy, there are ways to use Shopify Payments to do this. However, this isn’t always the best option for your business. When this is the case, you need one of these top Shopify apps for payment.
What Do Shopify Payment Apps Offer?
Shopify payment apps offer you a unique way to collect payments that might be a little more complicated than Shopify offer. For instance, they can offer you the chance to send invoices to collect payment through cash, check or direct bank transfer. Or you could set up payment plans, membership plans or something else.
Finally, you might want to have an option that allows you to combine online orders with in-store options. Therefore, you need one of the Shopify payment apps that allow you to take payments in person and process online orders.
There are lots of options online, and you’re free to cancel an app and switch if needed. Some of these are free and others require a payment upfront and as a percentage of the transaction fee.
Best Shopify Payment Apps – Our Top Picks:
Bold Subscriptions
Bold Subscriptions is one of the most used payment subscription solutions on the Shopify platform and is used by more than 11,000 stores on the Shopify Framework. It is often the go-to solution for those who are on Shopify Plus (if you want more information about Shopify Plus, read this blog post here).
The app provides you with the software to be able to offer goods/services to your customers on a regular payment. Business models that it supports includes monthly clubs, membership sites, build-a-box platforms and more. You can choose the charge and the interval which payment is taken. This is a great app to allow you to grow a business that offers you regular, repeatable and reliable income.
For customers there is the opportunity to control their subscription. They can pause, edit, skip, or manage their next orders. This can include editing the order to add, remove or change quantity of the products inside the order. Plus they can change the frequency that the product is ordered.
You can offer customers incentives and alternatives to canceling if they look to leave your subscription service. This can help reduce unsubscribe rates. And finally, you can also allow customers to add one-off items to a cart without the need to subscribe.
Bold Subscriptions Highlights:
- Out of the box functionality, anyone can use this app without coding or developer skills.
- Give customers control of their subscriptions, reducing your own workloads.
- Use dynamic reward systems like a percentage off for every so many orders.
- Offer prepaid, gift vouchers and allow for flexible shipping.
Front Systems
This app has many functions and if you operate in Norway, you can use the app to access the iPad POS-app, FrontKasse. This allows any store in the country to sell in-store, accepting payments through Norwegian bank terminals and through the mobile payment app, VIPPS. However, this app isn’t just about payments.
You can import product data from suppliers in an instant. This helps you save time by not having to manually enter product data into your inventory database. There are four different methods to this, so if one way doesn’t work for you, you can try a different one without having to swap app. And you can start selling the products as soon as they arrive at your store as the intelligent Front Systems automatically copies the inventory count into your Shopify store.
You can also use the RFID reader with the iPhone app, FrontZapp to reduce the time it takes to receive goods in your store. This also helps you to keep an accurate count of your stock as well as ensure that you’re not overselling your products. Something that can make customers unhappy and tarnish your reputation in the market.
Front Systems Highlights:
- Easy manage payments and incoming stock.
- Great for stores with physical presences in Norway.
- Cut down the time it takes to log in new stock.
- Better stock accuracy,
Split ‑ Partial Payments
Sometimes customers want to pay for an order using more than one funding source. This could be because they have one large order that is meant for several people, or they want to use more than one card to buy a high-ticket price item. This app is the only way that you can offer that service to your customers.
The app allows for the order to be paid not just by various cards, but also by different methods. For instance, some customers can pay via credit, others debit cards and others via PayPal. The app allows for the payments to be taken all at once from the different sources or payers can be sent their portion of the fee through an email for them to pay. You can also send a reminder if they haven’t paid within a certain amount of time.
The app only charges its monthly subscription fee as well. There are no further transaction fees as all the payments are completed through the Shopify Payments system.
Split ‑ Partial Payments Highlights:
- Split payments between different sources.
- Numerous payers can be sent their portion of the bill automatically.
- Manually split the payment up for customers.
- Can send reminder when someone does not pay for their portion.
Recurring Payments & Orders
This app allows you to sell subscriptions, offer payment plans, complete pre-orders and more on your Shopify store, all from one dashboard and with ease. The app allows your customers to store payment methods, purchase any subscription on your store and manage their account without having to speak to you directly.
From inside their customer account they’ll be able to see their billing history, stored cards, addresses and more. And they can make changes as necessary.
This app is completely scalable, therefore, no matter how many subscribers you get, you can process them through the cloud based infrastructure that is offered through the developer.
Subscriptions can be processed on a regular system, whether this is weekly, monthly, annual or more. Customers can also customize any subscription package they have, adding items or removing them as necessary.
To build the number subscribers on your list, you can create promo codes. These can be applied once to orders or as a recurring discount on products. At the same time time, you can have the customer have a trial period and set a billing date on a calendar.
Recurring Payments & Orders Highlights:
- Rewrite the default text.
- Create custom billing dates.
- Can track affiliates.
- Can have discounts and trial periods.
Advanced PreOrder(Partial Pay)
If you’re selling products before they’re available (pre-order) then you will want a way that allows you to do this. This could be for products that are coming soon (like new releases) or for items that are out-of-stock. This strategy allows you to keep sales, even when you have no stock to sell and keep customers happy. It also saves the customer time by allowing them to order and get the product to arrive when it is available.
Any admin of the Shopify is allowed to enable/disable the ‘Advanced Pre-Order’ function. And installing the app is as easy as it could be. You don’t need to know any code or developer skills.
The app can also help improve sales in other ways. This includes enabling related products for any product page. You can also schedule pre-orders, so you can get new products uploaded, available for pre-order before they’re available. Therefore, you can make money on the product as soon as you know you’re going to stock it.
There is the ‘notify me’ function that allows customers to receive a notification if they’re waiting for a product to come back into stock. This will include the capture of an email address, that can be used for marketing later on.
Finally, there is the option to have a fixed or percentage payment for products on pre-orders. This confirms that the customer would like the product, but offers them less risk when it comes to making a purchase.
Advanced PreOrder(Partial Pay) Highlights:
- Pre-orders of products coming soon to your store or currently out of stock.
- Allows for notifications when products are back in stock.
- Can offer customer to pay for only a certain amount of the product.
- Improve sales with related products option.
Membership Subscription Order
This app allows you to have an affordable way to collect recurring payments from members and regular orders from customers. You get lots of great features with this app including the option to hide/show content from your store including pages, products, collections, blogs, and more. Therefore, you can limit some products to just your members.
You can set up unlimited membership levels that can be at any levels. This can include free membership levels. Each membership level can have a custom form and customer signup process that includes an account activation email. Members can be given discount codes and this can be applied to one payment, to additional orders or to recurring payments, whatever your business model is.
And you can have one-off payments or recurring payments setup with ease. And if you want to hook customers before they start paying, you can offer a free trial period.
To help with marketing, you can also capture the data of the customer if they attempt to complete a membership, but don’t complete. This allows you to have abandoned cart campaigns to convert them at a later date.
Membership Subscription Order Highlights:
- Set up discounts and trial periods for your new customers.
- Initiate abandoned cart campaigns for those that don’t complete their membership signup.
- Can have one-off payments for additional products or products that can’t be bought on subscription.
- Easy to use and can set up an unlimited number of subscription plans.
Affirm pay‑over‑time messaging
Affirm is a way for customers to pay for products over time. There is no deferred interest, compounding interest or late fees with this system of payment, the customer will see what they have to pay exactly at the checkout and they can set their payments to a budget friendly schedule.
This app therefore allows more customers to afford your products and you can start to grow your business faster. This app has also been linked to higher conversions and better order values. You can also take advantage of Amplified marketing with Affirm audience insights, campaigns and more to help you grow faster than you would without the app.
Affirm can offer you many marketing opportunities, this includes awareness, consideration, intent, conversion and more.
Affirm pay‑over‑time messaging Highlights:
- A free-to-install app.
- Allows customers to pay for orders over a longer period of time.
- Offers marketing opportunities.
- Increases conversions and average order values.
Point of Sale
Shopify POS app allows you to have your online and retail stores aligned so you can streamline the payment system of your store. It allows you to build strong relationships with your customers. It allows you to make sales, track performances, manage customers, orders and stock levels. You can also allow customers to order online for local delivery or pickup from your physical location.
And if you have more than one location, you can sell inventory from one location at another. This is great if an item isn’t stored at one location, but the customer is there.
With the app you can accept payments anywhere on iPhone/iPad, with ease and you can accept a wide variety of payments with low rates. And you can see the profiles of your customers whether they’re online or in your store.
The app allows for the management of an unlimited number of SKUs. And reports by the developers have shown that by unifying the online and in-store sales has seen revenue growth by over 30% for some stores.
Point of Sale Highlights:
- Track which employees have the best sales records.
- An unlimited number of SKUs.
- Can sell items that are at other locations.
- Combines online and offline payments into one system.
Simplio: Simple Invoice
Sometimes you want customers to pay in cash, cheque or bank transfer. This is okay, you will need to send an invoice to them for them to get payment details and send the money they owe you over. This free app allows you to create easy, branded invoices that can be emailed over to your customers that can include payment details.
This is a great option for many business models, including those that have custom prices. The invoices can be automatically created and sent to their email inbox. Or the invoices can be created manually and sent by you.
Establishing the app on yours tore is really easy. You don’t need developer skills or know any coding. It can be running in under a minutes and for the price, there is no reason why you shouldn’t use the app. All actions can take place right inside the Shopify dashboard.
Simplio: Simple Invoice Highlights:
- Free app that can help you send invoices to your customers.
- Invoices can be branded.
- Automatically send or manually create and send.
- All actions can take in place in the Shopify dashboard.
Conekta Offline Payments
This app is only available for those stores which are in Mexico, but it adds new payment methods to your Shopify store that includes cash payments and bank transfers. The customer only needs to go to a Oxxo Pay point and hand over the cash with a 14 digit number that relates to their order on your store. When processed by the cashier, you’re sent a notification that the payment has been made and you can fulfill the order.
The email that is sent with the Oxxo number can be branded to your own, so you create a seamless experience. And you can set an expiration date to ensure orders aren’t left in limbo for an extended period of time. Or you can re-send the order information to remind customers to pay.
This app can be installed and is available in both English and Spanish.
Conekta Offline Payments Highlights:
- See a full list of the orders and what stage of payment they are at.
- Customize the email notifications so they’re branded.
- Offers customers numerous ways to pay for orders.
- Simple to use and comes with English and Spanish versions.
Key Features of Shopify Payment Apps
Subscription Management
Shopify payment apps allow for tailored subscription models, catering to a variety of business needs and customer preferences.
These apps enable customers to adjust their subscription details, providing a personalized shopping experience.
Businesses benefit from the ability to set up recurring revenue streams, ensuring a predictable and steady cash flow.
Multiple Payment Options
Providing various payment methods addresses customer needs, leading to better conversion rates at checkout.
Incorporating global payment gateways and flexible solutions like split payments appeals to budget-aware shoppers worldwide.
Enhanced Security Features
Advanced security protocols protect against fraud, building trust with customers and safeguarding business interests.
Encryption and compliance with industry standards like PCI DSS ensure that customer payment information is secure.
Real-time fraud analysis tools help to prevent fraudulent transactions, reducing the risk of chargebacks and financial loss.
Enhancing Shopify Payments
Subscription Flexibility
Shopify payment apps provide diverse subscription choices and discounts to encourage repeat business.
Customers have control over their subscriptions, enhancing autonomy and overall satisfaction with the service.
Promotions on recurring orders can greatly increase revenue, showcasing the effectiveness of subscription discounts.
Fraud Prevention and Management
Implementing pre-shipment fraud checks and customer analysis reduces false declines and chargebacks, enhancing security.
Guaranteed chargeback protection and dispute resolution build trust, while verifying customer details enhances security.
Payment Flexibility
Split payment options and multiple credit card use can ease customer spending and potentially boost store conversion rates.
Providing various payment methods and partial payments addresses different customer preferences, enhancing their shopping experience.
Conclusion: 10 Best Shopify Payment Apps
Improve your store’s payment functions with one or more of the Shopify payment apps that are included in this list. They can help you give customers more chances to pay, offer different product types or even create invoices to sell manually to your customers via bank transfer or cash. The question that you need to ask: which Shopify payment apps will you install?
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How do Shopify payment apps handle refunds and returns?
Shopify payment apps usually provide straightforward processes for handling refunds and returns, making after-sales service easier, ensuring a smooth customer experience.
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How secure are Shopify payment apps?
Shopify payment apps prioritize security with features like SSL encryption and compliance with PCI DSS standards which protect both merchant and customer data to prevent unauthorized access and fraud.
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Can customers use digital wallets with Shopify payment apps?
Shopify payment apps typically allow the use of digital wallets, offering a quick and secure checkout process. This convenience can lead to higher conversion rates and customer satisfaction.
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